Increasing amounts of natural methane emissions

methane in siberia by Zina Deretsky, NSF
SCIENCE: The Great Arctic Gas Leak
[Via AAAS News]

Ancient permafrost submerged in the Arctic Ocean is releasing methane gas into the atmosphere at rates comparable to previous estimates for all the world’s oceans combined, researchers say. This underwater permafrost represents a large but previously overlooked source of methane, and experts say that similar but more widespread emissions of the gas could have dramatic effects on global warming in the future.

The discovery creates “an urgent need” for further research to understand the methane release and its possible impact, researchers say in the new issue of Science.

[More]

This is not good news.

There are a couple of very worrisome reports that have come out recently looking at methane emissions. The first one deals with methane production, which I have mentioned before. Remember, methane dissolved in ocean water degrades to CO2, lowering the pH of the oceans and making it harder for them to take up atmospheric CO2 but also meaning that less methane actually makes it to the surface to be transferred to the atmosphere. This paper describes a process where methane is able to be directly transferred, resulting in increasing atmospheric methane levels.

And remember that over a twenty year period, methane is about 70 times a more potent greenhouse gas than CO2.

The release of methane from natural sources, such as the oceans and wetlands represent only perhaps 25% of all methane emissions. Most of the rest is due to totally human-caused reasons. These include livestock emissions, rice paddies, and fossil fuels. These are all things that have only produced such high levels of methane in the last hundred years. The natural methane cycle probably emits about 150 teragrams of methane per year.

But the new paper in Science – Extensive Methane Venting to the Atmosphere from Sediments of the East Siberian Arctic Shelf – demonstrates that the release of methane from Arctic permafrost sources is much higher than previously believed. The waters of the East Siberian Arctic Shelf are supersaturated with methane at all depths. This methane is being released from undersea deposits because the previously impermeable permafrost layer is degrading, due to increased temperatures in the Arctic. Previous to the warming, the methane was trapped beneath the permafrost. Now, it is being released.

And because this column of water here is so shallow (average depth is 45 m) most of the methane is not oxidized to carbon dioxide, as seen in the open oceans, but is directly vented to the atmosphere as methane.

This means that much more of the methane makes it into the atmosphere than regions closer to the Equator. Most likely over 8 teragrams of methane is outgassed a year. This is an example of positive feedback loops due to warming. A warmer Arctic releases more methane, which makes the climate warmer, releasing more methane.

This is almost as much as had been previously attributed to the entire global emission of methane from clathrates. More than previously expected from just one area in the Arctic.

The other paper – Large-Scale Controls of Methanogenesis Inferred from Methane and Gravity Spaceborne Data – examined the increase in methane emissions from another source – wetlands. Using satellites, they were able to measure the increase in methane emissions since 2003. They found that globally, the amount of methane entering the atmosphere from wetlands has been increasing each year. In 2003, the total of methane being emitted by wetlands was about 170 teragrams a year and had been flat for many years.

By 2007, the amount of methane being emitted globally had increased by about 10 teragrams a year:


global methane wetlands

So, in less than 4 years, the amount of methane being added to the atmosphere every year by wetlands had increased 6%. And again, almost all of this increase appears to be due to a warming climate.

These two papers show that there are much greater amounts of methane being produced each year because of a warming climate. This just adds to the tremendous increase in methane levels over the last 150 years or so.

Here is a graph of the increase of methane in the atmosphere during historical times, comparing ice cores from Antarctica and Greenland:


ice cores methane

Over the last 400,000 years, methane has varied from about 350 parts per billion (ppb) to 700 (green line).


methane

We are now at about 1788 ppb, more than double any amount over the last 400,000 years Actually, it is double what it was in the 1750s. After an almost decade long lull with little increase in atmospheric methane, we are beginning to see increases again. In fact, there has been a substantial increase in atmospheric methane levels since 2006, paralleling the amounts that these two papers suggest have been emitted. This is particularly disturbing because of what has happened in the past due to possible methane emissions.

The largest mass extinction in the planet’s history may have been due to a rapid releases of huge amounts of previously buried methane. The Permian-Triassic extinction happened 250 million years ago, resulting in the extinction of 96% of all marine species and 70% of land animals. It is the only extinction event that actually had a huge effect on insect populations. TMethane emissions appear to be the most likely culprit. That is because it is easy to tell when large amounts of organically-derived methane is released. There was a rapid change in the atmospheric ratios of carbon isotopes.

Only methane presents an avenue for so much organically-derived carbon to have been released so rapidly.

Again, the greatest excursion of temperatures in the current Era, the Paleocene-Eocene Thermal Maximum, happened 55 million years ago and also appears to have seen accompanied by large releases of methane.

Both of the events took place very rapidly in a geologic sense. Perhaps in less than 1000 years. Well, we are about 200 years along that time line.

Methane release can be the one thing that shifts us to a different climate regime, one that may well be irreversible, no matter how much we reduce carbon dioxide levels.

[Listening to: Beltane from the album "Songs from the Wood" by Jethro Tull]

Just the coolest thing

Sign of the apocalypse: blood waterfalls
[Via Bad Astronomy]

Our planet is a weird place. I can imagine visiting Antactica, seeing nothing but white ice and gray rocks for days on end… but then, how would you react when you saw this?

bloodfalls

Yegads! That is a part of Taylor Glacier, specifically the Blood Falls, located in the dry valleys of Antarctica. Apparently, a lake was covered by the glacier about 2 million years ago, trapping the microbial life inside. They have evolved independently of outside life for all that time, and were discovered due to a few leaks from under the glacier.

The water coming out is red due to iron, and is incredibly salty with almost no oxygen in it. The microbes — 17 different kinds have been found there — must use sulfur as a catalyst instead of oxygen, which has never been seen before.

It’s always surprising when an entirely alien ecosystem is found on Earth. It makes me hopeful that when we start to explore other planets, we’ll find life in splendid and incredible varieties. Nature is clever, vast, and has had a long long time in the lab to experiment. If we can find things so alien in a place so familiar, what will happen when we explore a truly alien world?

Image credit: United States Antarctic Program Photo Library

[More]

What a fascinating image!

This is the surface manifestation of one of the most unique environments on Earth. The microbe’s have evolved in a region cut off from the rest of the planet, one with essentially no free oxygen to use for creating the energy needed for life. This diagram provides some useful information:


201003040955.jpg

These bacteria are similar to ones found in normal marine environments, except they have evolved over a million years or so to survive in one of the most inhospitable environments on the planet.

Figuring out how they manage to do this is really going to be a lot of fun and has strong implications for how life on Earth, and elsewhere, can manage in extreme environments.

At least extreme in today’s world. Probably not so extreme when life first appeared billions of years ago.

How a blind man came to play a video game

zelda by alisdair

Blind gamer speedruns Zelda with help of 100,000+ keystroke script
[Via Boing Boing]

A group of gamers from around the world created a 100,000+ keystroke script for speedrunning The Legend of Zelda, which was used by a blind gamer in Ontario complete the game. Jordan Verner, who is blind, posted a video of himself playing Zelda and asking for help to complete the game. This inspired other gamers to spend two years composing a script that Verner could follow, and at last he did:

So Williams and thee other diehard gamers each took different parts and copied down every single move.

“Every time we make a move, we roll, jump, do anything, we type down on the computer exactly what we’re doing,” said Williams.

Verner would then take the script and have his computer read it to him as he played.

An average gamer will take about a week to play through the entire thing, but this project took almost 2 years and more than 100,000 keystrokes. Finally, Jordan beat the entire thing.

“I felt great,” said Jordan. “I felt strong. I felt like the sky’s the limit.”

“I’m glad everyone can see and learn from this that just because a person has a disability doesn’t mean they can’t do a normal thing, like play a video game,” said Williams.

Camden man’s project helps blind man beat video game
(via Neatorama)

[More]

What I like about this story is not just the dedication of a blind man to play a video game. It is that a spontaneous ad hoc group of people came together for a difficult task and succeeded. People with no other need than to help someone else accomplish a difficult task, set themselves a difficult task also – render all the game play of Zelda into a form that a blind person could follow.

They then took two years to complete the task that the blind man was able to take and complete his task. Think about that. This was all done with technology that did not exist just a few years ago. The gamers were from very disparate locations not in the same room while working on this task, They had to overcome all sorts of barriers (like coming up with some sort of standard way to describe each keystroke), Then they had to put it in a form that could actually be spoken clearly and precisely enough to allow the blind man to accomplish his goal.

Why did these strangers come together to help someone they did not really know? Well, generally people like to help others if they can. In this case, it also presented the sort of puzzle that is attractive to a certain kind of mind – how would you describe the game play of Zelda to a blind man so he could play.

A nice story, not only of human altruism but also of how technology can be leveraged to solve a difficult problem.

Mitochondrial DNA and cander

mitochondrian by biology flashcards

Tissue differences within us track cancer, hinder forensics
[Via Ars Technica]

The process of copying DNA, which has to take place every time a cell divides, has a low but measurable rate of error—in other words, it introduces new mutations. Add that to the fact that it takes a lot of cell divisions to go from a single fertilized egg to the trillions of cells present in an adult, and there’s an obvious conclusion: not all of your cells have precisely the same DNA. In recent years, DNA tests of different tissues have confirmed this for a number of genes, but a new study of mitochondrial DNA indicates that significant differences between tissues can be associated with diseases like cancer, and may have implications for forensics.

Mitochondrial DNA is a small genome that is present in the organelle that helps provide ATP to power eukaryotic cells. It doesn’t have access to the full collection of DNA repair enzymes that help keep the DNA in a cell’s nucleus from accumulating damage, so it tends to pick up mutations a bit more rapidly. That tendency is exacerbated by the fact that there are many copies of the mitochondrial genome present in an adult: each cell can have hundreds of mitochondria, and each mitochondria carries about five to ten copies of the genome.

[More]

This is a fascinating paper from Nature. They were able to sequence the DNA found in the mitochondria of every cell. There are usually many mitochondria per cell and they are inherited in a non-Mendelian way. Tat is, when cells divide, they do not necessarily get equal complements of each mitochondrion.

And, since the DNA replicates in a somewhat unusual manner inside the mitochondrion, it appears to have a error rate perhaps several orders of magnitude higher than nuclear DNA. So, as this paper showed, while we inherit the mitochondrial complement from our mothers, replication over the years can result in quite a hodge-podge of mutations in our mitochondrial DNA, even amongst different tissue.

The cool thing is that some mitochondrial DNA changes seem to be found in certain tumors. And these altered DNAs can be detected in the patient’s blood, making it possible to not only possible detect the cancer, but also record the impact on the cancer by treatment, as the amount of altered DNA drops.

It does make forensic techniques based on mitochondrial DNA sequences a little trickier now, as a single person may have a whole set of different DNA sequences from their mitochondria.

Penguin Books bets big on iPad interactive content

penguin books by DaveBleasdale

Penguin Books bets big on iPad interactive content
[Via AppleInsider]

Penguin Books demonstrated of a series of interactive ebook titles the company is preparing for Apple’s iBook Store for iPad, in a presentation looking at how the company plans to accommodate a transition to digital ebooks.

According to a report by PaidContent UK, the London-based publishing company expects ebooks to grow from 4% of its sales to 10% next year, thanks in large part to the market Apple is creating with the iPad.

[More]

Penguin has been at the forefront before. They revolutionized the whole idea of paperback books back in the 30s.

Be sure and check the video out. For some types of books, like children’s or textbooks, iPad apps will be pretty nice. But the inclusion of GPS maps directly in a travel book offers something pretty unique.

While still in development the starfinder book, by using the compass in the iPad, can show you what your night time sky is and identify the stars. Try that with a Kindle.

And what the CEO of Penguin states is pretty much right one. “We’ll have to become more innovative and take some risks,” Makinson said. “We’ll need above all to listen to our readers, to understand what they want and what they’ll pay for. But if we can do all that, which is a big task, I agree, we’ll have a great and varying digital business.”

Penguin Books really seems to get that by embracing change they can do things unavailable before. This happens with every new medium. Early TV was just radio with pictures, until some innovative people starting toying with the medium itself, twisting into something completely new, like Ernie Kovacs. His use of changing perspective, visual tricks, blackouts, and sheer visual non-sequitors are all part of the video arsenal today.

Instead of just putting books on an iPad, publishers like Penguin are at the beginning of something new. It will be very enjoyable to see what they produce, especially why other, less creative publishers moan about the new digital medium for their books.

And a little Ernie Kovacs:

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