Not as simple as supposed

“Serious doubt has been cast on the theory that…chronic fatigue syndrome is caused by a new retrovirus,” The Guardian reported. The newspaper said researchers from London have failed to replicate findings from the US that suggested a possible role for a virus called XMRV in causing CFS, also known as ME (myalgic encephalomyelitis).

In the new study none of the 186 UK CFS patients tested carried the XMRV virus, in contrast to the US study in 2009, which found that about two-thirds of 101 CFS patients tested had the virus. Why the two studies have different findings is not clear, but the results of the UK study do not support an association between XMRV infection and CFS in UK patients. This highlights the importance of different research groups repeating experiments in different populations.

CFS is a complex disease, and its causes are not well understood. Although an association with XMRV has not been established, this does not rule out the possibility that viral infection is involved. Much more research will be needed in this area.

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I wrote about the original research when it came out in October. I also mentioned that some work with German populations seemed to give different results than US. Now this work adds even more complexity.

This is something science does all the time. Finding an interesting set of data, observe some of the things it correlates with and present a hypothesis. This leads to further research to investigate the hypothesis.

Thus, we now seem to have something either much more complex than originally proposed or perhaps there is no real correlation at all. More work will help. Such is research at the edge.

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OMG

More about this over at Warming Glow.

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Thankfully we only have to watch a little bit of it via YouTube.

This is the most amazingly bad pilot clip I have ever seen. I would imagine that it does not appear on the actor’s resumes, although IMDB has the info. INterestingly, John Ritter was executive producer and it also had his future wife, Amy Yasbeck, in it, some 9 years before they married.

And, it had music by Andy Summers, of the Police! I wonder if they should try again. CGI would work better than a puppet. Maybe a cable series.

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Frank Capra knew

Over 50 years ago, Capra produced a movie that described climate change:

I read about this from an Andrew Revkin blog entry that also has a nice link to the first article about climate change in the NYT from 1956. The original conjectures are pretty old. It is just that we have much better data than we did then.

I am reminded of an Asimov column, discussing how scientists are always wrong. They may be wrong but they are less wrong than they were before and get less wrong as time goes on. In general, we move closer and closer to a truly accurate description of the natural world.

Researchers understand this but more than a few members of the public do not.

[Listening to Fanfare for the Common Man from the album "A Copland Celebration Vol. 1 - Orchestral and Chamber Works" by Aaron Copland & London Symphony Orchestra]

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One of the best posts on science reporting ever

The virtues–and perils–of contrarian stories (*Update):
[Via Knight Science Journalism Tracker]

A fascinating story form Reuters, NPR and many others: Smokers who quit have a 70 percent increased risk (compare to people who never smoked) of developing diabetes.

How could that be? Does smoking protect against diabetes? What is it in cigarette smoke that could increase the risk when it’s withdrawn from the body. As I say–fascinating!

Except that it’s not. The ex-smokers gained weight, and that’s probably what caused the increased risk, say the authors of the study.

burgerKate Kelland of Reuters gets to the explanation in the second graf, and follows that quickly with the researchers saying nobody should use the findings to justify continuing to smoke. But maybe even the second graf isn’t high enough for mention of the weight gain. What this study says to me is: Gaining weight increases the risk of diabetes. That’s not exactly news. (Charles Dick also gets an “editing” byline on this story. A quick walk through the Reuters site shows that a lot of stories now have editors’ bylines. Could someone at Reuters email me with an explanation? I’ve never seen that before. I apologize if it’s been going on at Reuters for years and I’ve missed it. If this isn’t unique, it’s certainly unusual.) *Update: A Reuters source points me to the company’s journalism handbook, which says that these “sign-offs,” as Reuters calls them, “demonstrate accountability and also give clients a contact point if they have problems with a story.” And note Charlie’s comment below.

Richard Knox at NPR likewise does a perfectly fine story, but it amounts to the same thing. A lot of other news outlets weigh in with their own versions of the story–the BBC, The Los Angeles Times, the Baltimore Sun, Business Week, and many others. I’m not going to link to them all, because it’s not the stories that interest me.

What intrigues me is: Why did everybody write this story, which seems to amount to very little? Most readers understand that weight gain can lead to diabetes, and all science writers ought to know that.

Here’s my suspicion: Many science writers love contrarian stories. Remember the stories about genetically engineered tobacco plants being use to produce drugs, even, someday, drugs that might fight cancer? Cool, or what?

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The media purposefully confuses its readers in order to tell a better story. People do not get diabetes from quitting smoking. They get it from gaining weight. But the writers make it sound like continuing to smoke is better for people than getting diabetes from stopping.

Misleading in order to get people to read the article. Dog bites man stories are not interesting. Man bites dog is. Nothing new here but it is refreshing to see a science writer admit as much, especially with this personal anecdote:

Once, when I was covering the American Heart Association annual meeting for the AP, the local buro went to a hamburger joint in the building where the buro was located (not a lot of enterprise involved), and photographed a few cardiologists chowing down on huge burgers. The implication of the accompanying story was that cardiologists were ignoring their own advice, stuffing themselves with the artery-blockers they so sternly and unpleasantly warned us about.

The buro–and the general desk in New York–thought it was a perfectly fine, light story. Except that the implications of the story were wrong. Anyone who has been to these meetings can see (I don’t have data for this) that cardiologists are a lean, mean group. When the heart docs are in town, there is near gridlock on the jogging paths and in the hotel exercise rooms. While some of them might be caught red-handed in a burger joint now and then, these are not people who eschew their own advice.

I tried to make that argument to the general desk, and I got exactly nowhere. Which is why I’m exacting my revenge right now, right here, exposing the whole sordid mess!

One reason that MSM are such poor disseminators of scientific information – A good man bites dog story always wins, even when it is wrong and misleading. Then the poor scientists are blamed for not properly educating the audience. Doing a better job of speaking would be good for scientists to do but not unless the media makes substantial changes.

Chris Mooney has some useful points but I think his conversation would have more impact if he would work with the general desks at newspapers, etc. and had them correct their policy of running a contrarian story even when it is misleading. Until that happens, it does not matter HOW good a communicator a scientist is.

Ironically, Mooney is a Knight Science Scholar, which also funds the Tracker. Perhaps Charlie Petit at the tracker could talk with Mooney.

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Putting carbon dioxide into rocks

Small pubs: Near New York – a huge basaltic repository for sequestered CO2?? PNAS paper says yes.:
[Via Knight Science Journalism Tracker]

BAsaltNewYork
Boy, Tracker had vexing equipment problems this morning – logy laptop, slow and choking on image downloads. So not much posting. But as the moment to stop approaches, here’s a good story in PNAS that seems to merit more attention. In Proceedings of the National Academy of Sciences, Columbia U. and Rutgers geologists report on the immense potential (that’s potential as in maybe with multiple big ifs) for storing CO2 underground right near huge American population and industrial centers. A review of data finds that deep strata of basalt, remnants of ancient lava flows, are sufficiently porous to absorb lots of CO2 and mineralize it into stone.

A few outlets pick it up, chief among them National Geographic News where Brian Handwerk reports that these immense “vaults” beneath the shallow seafloor are ripe for further research. One possible hazard, he reports: Earthquakes, plausible should the storage process lead to settlement or heaving by the repositories. I’ve heard that the flood basalts of the Pacific Northwest look perfect for such storage – but such things near New York? Even better.

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No link to the article, which is behind a paywall but it is relatively cheap to purchase a copy. It is a cute idea to take the carbon dioxide that we generate because we remove fossil fuels from the ground and put it back into the ground.

Still lots of things to worry about but these types of basalt occur all around the world. Might be a nice transitional method as we move away from fossil fuels.

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